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INDEXED
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SequenceFile
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IGVFFI5362KWQZ
IGVFFI5362KWQZ
released
validated
Json view
File Set
IGVFDS7938OXSK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 5376
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5376_R1
md5sum
d08662979a23c78540c81202ecb689b0
Content MD5sum
63e544071883d7469851a1971a46f302
File Size
3.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1590_L4_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5376
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
84258859
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9503PHEI
yaml
seqspec
seqspec of IGVFFI5362KWQZ, IGVFFI6526BCJI
Jason Buenrostro, Broad
1.3 KB
validated