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INDEXED
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SequenceFile
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IGVFFI5348GEHF
IGVFFI5348GEHF
released
validated
Json view
File Set
IGVFDS1628VOEK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8840
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8840_R1
md5sum
7cb3708c36041e37ed97b05f405ea9f6
Content MD5sum
ca959b211b4f47967030cd79cb432be1
File Size
1.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2286_L5_SS-PKR-177_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8840
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
23200927
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4166RBAA
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9224URBP
yaml
seqspec
seqspec of IGVFFI5348GEHF, IGVFFI8827JDEW, IGVFFI0385MPZI
Jason Buenrostro, Broad
1.3 KB
validated