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SequenceFile
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IGVFFI5344RKND
IGVFFI5344RKND
released
validated
Json view
File Set
IGVFDS5810IJHF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4001
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4001_R1
md5sum
cc32c9767439f14b02f22c91a15335e5
Content MD5sum
45770231d50aa10e11cfa82ade96826e
File Size
1.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-733_L1_SS-PKR-181_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4001
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
27315407
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6601RSAH
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 181)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4184MUIH
yaml
seqspec
seqspec of IGVFFI5344RKND, IGVFFI1467ERDU, IGVFFI7218PVOB
Jason Buenrostro, Broad
1.3 KB
validated