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IGVFFI5335WEFD

released
validated
File Set
IGVFDS6875UROA(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
80c425a329d5ced37d9fe6007792934c
Content MD5sum
160aa017115e51d2f64fc5b1ac157f9a
File Size
12 GB
Submitted File Name
igvf_003/nova1/igvf_003_B11_D_nova_N1_L002_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
HKMGCDSX5
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
163919654

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; Mus musculus 129S1J (male, 72 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8391ZSZU, IGVFFI5335WEFD
Ali Mortazavi, UCI
1.4 KB
validated