{
"@context": "/terms/",
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"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI5328UCLM",
"aliases": [
"jesse-engreitz:220829_8merInsertion-Jurkat_NoStimulation-Amp_PPIF_promoter-BioRep1-FFrep2-BinB-PCRrep2_R2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI5328UCLM](/sequence-files/IGVFFI5328UCLM/) has in progress subobject auxiliary set [IGVFDS3705SHZY](/auxiliary-sets/IGVFDS3705SHZY/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI5328UCLM/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "a95e5f532db2aea83ac0a8d74cb2480e",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T19:00:19.470919+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS3705SHZY/",
"file_size": 13340011,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI5328UCLM/@@download/IGVFFI5328UCLM.fastq.gz",
"illumina_read_type": "R2",
"index": "CTATGCGT:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "aceefd6619f2556e93534161ca2d7191",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 379511,
"release_timestamp": "2023-12-20T23:43:53.578163+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/d1aac97c-017b-4b8a-bf22-aeacb34ac7fb/IGVFFI5328UCLM.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF_S3-BioRep1-FFRep2-BinB-PCRrep2_S65_R2_001.fastq.gz",
"summary": "R2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "d1aac97c-017b-4b8a-bf22-aeacb34ac7fb"
}