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SequenceFile
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IGVFFI5328PIII
IGVFFI5328PIII
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS3245PEOK
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 342
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX21-SC4_snATAC_S1_R1
md5sum
89d6b91208599b809a0ec8d3f75afa90
Content MD5sum
1417a9928540e3a6217501bd72f02bf9
File Size
33 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX21-SC4/AH7T7MDSX7/XHLT1-POOL-XX21-SC4-ATAC_S12_L003_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
342
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
618473805
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9160FXRO
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 44.0 years) peripheral blood mononuclear cell; ... and 15 more samples