IGVFFI5308TEFF

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7523ZOWN(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X045_G4_P046_L002_R2

md5sum

c0f0c89fcdd80f37ef277f51371d56e2

Content MD5sum

b5247aff761db142f0a8b4c0dfc6b432

File Size

12 GB

Submitted File Name

Multiome_RNA_X045_G4_L004_P046_S8_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VKTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

247296075

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8872IRZA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 84 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples