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IGVFFI5294CRXQ

released
validated
File Set
IGVFDS8161SJZG(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 7
File Format
fastq
Content Type
reads
md5sum
9b31b23a0dea52d9961ba6f8a2c84c82
Content MD5sum
e97574b8295cf2f39fa286f75d6f7cd8
File Size
10 GB
Submitted File Name
igvf_005/nova2/igvf_005_B16_D_nova_N2_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7
Flowcell ID
HVYNYDSX5
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
150687563

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NOD/ShiLtJ (female, 72 days) pituitary gland tissue; Mus musculus CAST/EiJ (female, 69 days) pituitary gland tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.5 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5294CRXQ, IGVFFI7380QXCT
Ali Mortazavi, UCI
1.3 KB
validated