IGVFFI5271ZCHA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7237MNBS(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP008_G7_P058_L003_R2

md5sum

3952937078e22a3e62d1d7862ecf252a

Content MD5sum

33ed3894840ab6ea7e4078a4d34c8d8a

File Size

2.5 GB

Submitted File Name

Multiome_RNA_RP008_G7_L007_P058_S7_L003_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

58938345

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8027AHHD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples