IGVFFI5265QRGA

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8825BDYZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G5_P072_L008_R1

md5sum

8908f473dfb348d77e2d2cce99de3288

Content MD5sum

972aa9bc6672120daed51b75b7f725ce

File Size

13 GB

Submitted File Name

Multiome_RNA_X053_G5_L005_P072_S69_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

148666997

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4261OSAU

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples