IGVFFI5256WMSQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9478NMMZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G4_P054_L007_I1

md5sum

97690a0660a26becb58ee9bc3aaefedb

Content MD5sum

0a24527e01bae004b877ff8135e1f3d5

File Size

323 MB

Submitted File Name

Multiome_RNA_RP005_G4_L004_P054_S39_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

53150266

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3046HYHX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples