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INDEXED
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SequenceFile
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IGVFFI5249TTRG
IGVFFI5249TTRG
released
validated
Json view
File Set
IGVFDS0937CDYE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8533
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8533_R1
md5sum
d04f7b245b26dc67e0f43c27374cb442
Content MD5sum
e9ca26f77e0a6fb389c55031615d1662
File Size
1.8 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2267_L2_SS-PKR-171_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8533
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
38096
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9938KYSQ
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 171)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2291WQMV
yaml
seqspec
seqspec of IGVFFI5249TTRG, IGVFFI6077IWXN, IGVFFI2480JSEF
Jason Buenrostro, Broad
1.3 KB
validated