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IGVFFI5243NDYA

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7476HGYD(scRNA-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
harinder-singh:multiplexed_perturbation_scRNAseq_20231117_GEX_NGS_LAF6401A8_L001_R1
md5sum
b464f780ae5e280685db67492ba83ec8
Content MD5sum
8e3ecfdc84aae27f113af9573e5d5cd0
File Size
2.5 GB
Submitted File Name
/ix/djishnu/Common_Folder/Pease_Data/20231110_PerturbSeq/2_111723_Hsingh_5Pv2_GEX_LAF6401A8_S24_L001_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
28
Read Count
114038148

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days; ... and 10 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene expression in sparse gene count matrix
Harinder Singh, University of Pittsburgh
835 MB
validated