Home

IGVFFI5241MPKQ

released
validated
File Set
IGVFDS2553TFCV(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
d9d9e5e4d4cfa4e8f954575dfb935a8d
Content MD5sum
6c4aad40e6405d62563c2c43207c36a9
File Size
6.3 GB
Submitted File Name
igvf_b01/next1/igvf_b01_B02_D_next_N1_R2.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AAC2L2NHV
Lane
1
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R2
Average Read Length
86
Read Count
148879092

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: left cerebral cortex tissue, female, Mus musculus CASTJ (72 days); left cerebral cortex tissue, male, Mus musculus B6J (72 days); ... and 6 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
404 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5241MPKQ, IGVFFI0800JAPD
Ali Mortazavi, UCI
1.1 KB
validated

Attribution

Award
HG012077
Principal Investigator(s)
Contact P.I.
Ali Mortazavi
Lab
Ali Mortazavi, UCI