Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI5233UAVD
IGVFFI5233UAVD
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8287AFDU
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 188
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX14-SC1_snRNA_S1_R2
md5sum
f5a72ed4a4e2b3ea6f3ddd09304c4bcb
Content MD5sum
751bf1b03befa3b92cac820858c21d64
File Size
13 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX14-SC1/BH73JJDSX3_ICJY07/XHLT1-POOL-XX14-SC1-GEX_S1_L002_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
188
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
282661661
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM4323TWYD
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 30.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 35.0 years) peripheral blood mononuclear cell; ... and 18 more samples