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IGVFFI5218MZJE

released
validated
File Set
IGVFDS9825YLAW(RNA-seq integrating an expression vector library of BATF3)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:cd8-tcells-rna-seq-chronic-activation-batf3-rep2-fastq-R1
md5sum
61902ccb0e0d6c15037fb509d1604bf8
Content MD5sum
3edf16a421152c377fd99e7de163a10e
File Size
1.3 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_2_T_cell_project_1/pSM65-IL-2-D2_R1_001.fastq.gz
Submitter Comment
Libraries prepared and sequenced by Genewiz. Unknown sequencing platform (best guess annotated)

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Lane
1
Illumina Read Type
R1
Average Read Length
150
Read Count
17538114

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
CD8-positive, alpha-beta memory T cell, Homo sapiens transduced (lentivirus) with a expression vector library

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
1.2 GB
validated

Attribution

Award
HG012053
Principal Investigator(s)
Contact P.I.
Charles Gersbach
Lab
Charles Gersbach, Duke