IGVFFI5217MTQV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0058HQMM(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G4_P062_L007_I2

md5sum

0b840b3178d39dbc2802ffc6e0b552cb

Content MD5sum

608e3580e889d368fa2959b0aa6ffc7e

File Size

388 MB

Submitted File Name

Multiome_RNA_RP014_G4_L004_P062_S32_L007_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

62405295

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8048XYHR

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples