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IGVFFI5210WGXF

released
validated
File Set
IGVFDS1479KDWW(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
82c49d048cc5909a2fc8de9d1323e7d8
Content MD5sum
3b96d57ab27159bee63cedfdb333d0b2
File Size
22 GB
Submitted File Name
igvf_015/nextseq/015_67C_S1_L002_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
2
Flowcell ID
AAC5N2NHV
Lane
2
Sequencing Kit
NextSeq 1000/2000 P3 Reagent Kit
Illumina Read Type
R1
Average Read Length
130
Read Count
309453347

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus B6(SJL)-Trem2<em1Aduci>/J (female, 65 days) hypothalamus tissue; Mus musculus B6(SJL)-Trem2<em1Aduci>/J (male, 69 days) liver tissue; ... and 94 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
893 MB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5210WGXF, IGVFFI4385HOXT
Ali Mortazavi, UCI
1.4 KB
validated