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SequenceFile
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IGVFFI5190IAVO
IGVFFI5190IAVO
released
validated
Json view
File Set
IGVFDS9951ASBX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3966
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3966_R1
md5sum
ecb0aed1ff7ef6d2599412f2e65012eb
Content MD5sum
5d6e5f9e425f36b450bae65a6ed5562a
File Size
635 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-689_L7_SS-PKR-173_2022-APRIL-R1-PLATE2-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3966
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
11741745
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3457JHWU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 4 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1141JEIC
yaml
seqspec
seqspec of IGVFFI5190IAVO, IGVFFI3980MARF, IGVFFI5644PIVA
Jason Buenrostro, Broad
1.4 KB
validated