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IGVFFI5168UTPN

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7435GWZK(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 254
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX16-SC4_snATAC_S1_R3
md5sum
f77694d311369f9bf97e6b6b31a8a955
Content MD5sum
2db57a26743760d6f90c642816aa74d9
File Size
13 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX16-SC4/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX16-SC4-ATAC_S11_L002_R3_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
254
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
90
Read Count
271379733

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF