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INDEXED
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SequenceFile
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IGVFFI5162FOSE
IGVFFI5162FOSE
released
validated
Json view
File Set
IGVFDS9828TNJA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8373
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8373_R1
md5sum
a0fa6c899036b9cf58d26cd4a1140112
Content MD5sum
29dcf4676b15b585a2fe268f1f0d4721
File Size
4.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2253_L4_SS-PKR-604_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8373
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
117265481
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7652DCKY
Tissue
left cerebral cortex
Mus musculus C57BL/6J (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 604)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3405IABA
yaml
seqspec
seqspec of IGVFFI5162FOSE, IGVFFI7740WFBQ
Jason Buenrostro, Broad
1.2 KB
validated