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INDEXED
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SequenceFile
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IGVFFI5134YECO
IGVFFI5134YECO
released
validated
Json view
File Set
IGVFDS4826YNLK
(snMCT-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C29_day1_L2_R1
md5sum
534bdbfc7ff0bc5ead9adea82ff3bebf
Content MD5sum
7a76193d8e011ba2e12b83848b76fc61
File Size
6.1 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C29D1-Pos1-A07_S7_L002_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
2
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.35
Read Count
80159434
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0122NJDW
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 1 day, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA