IGVFFI5133VJZX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2689NPPZ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G8_P056_L007_I1

md5sum

5fcc9cdbe0e66d7c2444d8dae030511c

Content MD5sum

dd373c3921d6c87c3f4017c8d12ddd0d

File Size

311 MB

Submitted File Name

Multiome_RNA_RP007_G8_L008_P056_S95_L007_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

54708682

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0124BONK

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples