IGVFFI5131XTZS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8668VCFD(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X045_G6_P046_L002_I2

md5sum

d31a26059a206bc22516d0cc6d6e5b8e

Content MD5sum

e9a4d858ba1110d14ddd471571afd5f1

File Size

1.7 GB

Submitted File Name

Multiome_RNA_X045_G6_L006_P046_S10_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VKTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

228874468

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0962IVEP

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 84 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples