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INDEXED
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SequenceFile
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IGVFFI5131FYGL
IGVFFI5131FYGL
released
validated
Json view
File Set
IGVFDS9175JJZU
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4413
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4413_R1
md5sum
85a53cb5494e8aecb5543eb76c6751b0
Content MD5sum
6ce4366885f2496c7e351c16af87c161
File Size
11 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1495_L3_SS-PKR-163_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4413
Flowcell ID
22JMFMLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
254074346
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7531SRQE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 163)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1294FQGM
yaml
seqspec
seqspec of IGVFFI5131FYGL, IGVFFI3481MVYE, IGVFFI6163QEYT
Jason Buenrostro, Broad
1.3 KB
validated