IGVFFI5121SBOG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1225ARBV(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G5_P056_L008_R2

md5sum

536f4d3d859384dac10e110766be3515

Content MD5sum

57cf0d68d1e6364d7c2b78b9b765a31a

File Size

3.1 GB

Submitted File Name

Multiome_RNA_RP005_G5_L005_P056_S76_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

72883352

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1655YUWG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples