{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI5106PKFS/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI5106PKFS",
"aliases": [
"jesse-engreitz:230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinA-PCRrep3_R1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI5106PKFS](/sequence-files/IGVFFI5106PKFS/) has in progress subobject auxiliary set [IGVFDS0646OEYU](/auxiliary-sets/IGVFDS0646OEYU/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI5106PKFS/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "7941d18e038dc79949ad326464535bf0",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T22:55:37.863438+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS0646OEYU/",
"file_size": 3225584,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI5106PKFS/@@download/IGVFFI5106PKFS.fastq.gz",
"illumina_read_type": "R1",
"index": "AGGTAAGG:ACTG",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 150,
"md5sum": "bceac9f44000a968b09d223bda1abf80",
"mean_read_length": 150,
"minimum_read_length": 150,
"read_count": 101972,
"release_timestamp": "2023-12-21T00:30:00.326921+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/ff4a5b57-c04a-49a7-89d2-126b2f08c83c/IGVFFI5106PKFS.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "230531S019-THP1-P151-Amp_PPIF_enhancer-BioRep2-FFrep3-BinA-PCRrep3_S201_R1_001.fastq.gz",
"summary": "R1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "ff4a5b57-c04a-49a7-89d2-126b2f08c83c"
}