Home

IGVFFI5103LWRW

released
validated
File Set
IGVFDS3861CXLU(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-dss05_prim_12k_1_ATAC.R1.fastq.gz
md5sum
32a0e6b94a375d4a25eec200554dd6ee
Content MD5sum
810c2cd22b46c312b9b2784e39d88c4c
File Size
3.1 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/dss05_prim_12k_1_ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS05-prim-12k-1_P1.64
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
49.56
Read Count
92042964

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5103LWRW, IGVFFI2541TDKG, IGVFFI1885ZBYE
Jason Buenrostro, Broad
1.2 KB
validated