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SequenceFile
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IGVFFI5080FNLG
IGVFFI5080FNLG
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1649BWGA
(single-nucleus ATAC-seq (10x multiome))
Summary
R2 reads from sequencing run 205
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX15-SC1_snATAC_S1_R2
md5sum
360e0c0af6da4c190b140d48b5e868eb
Content MD5sum
0b8439c73447bdafd08e4f37b9aef923
File Size
4.2 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX15-SC1/AH7MYFDSX3_ICJY08/XHLT1-POOL-XX15-SC1-ATAC_S4_L002_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
205
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
24
Read Count
249115231
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1205PSUM
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 24.0 years) peripheral blood mononuclear cell; ... and 18 more samples