IGVFFI5068YVOU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7239XGUI(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G6_P014_L002_R1

md5sum

e5e085567dc455fbfc515b1b3c7ec8c0

Content MD5sum

6687d88f2c5e2bee56b7d6a60660ebae

File Size

3.7 GB

Submitted File Name

Multiome_RNA_X014_G6_L006_P014_S18_L002_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

171180011

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9366LKIJ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples