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INDEXED
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SequenceFile
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IGVFFI5047FPXJ
IGVFFI5047FPXJ
released
validated
Json view
File Set
IGVFDS0580JTOM
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4352
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4352_R1
md5sum
6ef21f4e8186a1f2c616a6a2edf65e3a
Content MD5sum
310fe26012711cac59c148ede56f20c0
File Size
3.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-539_L1_SS-PKR-172_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4352
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
59826180
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5762CPQM
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0770KVRY
yaml
seqspec
seqspec of IGVFFI5047FPXJ, IGVFFI9996OZGD, IGVFFI1943OUBN
Jason Buenrostro, Broad
1.3 KB
validated