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SequenceFile
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IGVFFI5040DTDV
IGVFFI5040DTDV
released
validated
Json view
File Set
IGVFDS8938MFTZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1671
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1671_R2
buenrostro-bernstein:SS-LS_1671_R2
md5sum
1c066617744d24639e961b2799aac56f
Content MD5sum
2362794505d413107931cc38cfa78cf4
File Size
118 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1072_L4_SS-PKR-1_SS-V2-PLATE2-2nd-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1671
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
1754
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8523CFBV
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 1), male, Homo sapiens (29 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad