Home

IGVFFI5035AAFB

released
validated
File Set
IGVFDS4747BMDE(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
md5sum
4e046f84676b7b06f9dd1b3ca17a1b85
Content MD5sum
15a4223a6934210c64747a5f12ef898b
File Size
13 GB
Submitted File Name
igvf_008/nova1/igvf_008_B06_D_nova_N1_L001_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H2W3JDSX7
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
349000418

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus AJ (male, 69 days) epididymis tissue; Mus musculus PWK/PhJ (female, 69 days) oviduct tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.7 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI5035AAFB, IGVFFI3918LLZG
Ali Mortazavi, UCI
1.4 KB
validated