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IGVFFI5019AGXX

released
validated
File Set
IGVFDS5447HBUF(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
md5sum
c1908ed5443510b0a4338d4acf8e6624
Content MD5sum
ba2a5c97c2647c88472e66aa360e5dca
File Size
12 GB
Submitted File Name
igvf_004/nova2/igvf_004_B06_D_nova_N2_L001_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Flowcell ID
HTGM5DSX5
Lane
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
160444779

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus CAST/EiJ (male, 69 days) liver tissue; Mus musculus 129S1J (female, 72 days) heart tissue; ... and 126 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.6 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6980MBEF, IGVFFI5019AGXX
Ali Mortazavi, UCI
1.3 KB
validated