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INDEXED
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SequenceFile
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IGVFFI5012UHJY
IGVFFI5012UHJY
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validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1790XLZR
(scATAC-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
maya-kasowski:Scale_scATAC_lane6_R2
md5sum
f94714769037178273481210e42bf3d1
Content MD5sum
c7cabe47002fc09cbbdea2321371159d
File Size
44 GB
Submitted File Name
/users/shouvikm/data/Scale/SCALE_leukemia_01202023/fastqs_after_scATAC_Scale_pipeline/S701-S706/S706/S706P_S6_L003_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Maya Kasowski, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
6
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
104.2
Read Count
533577171
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1625LLXE
MultiplexedSample
bone marrow
multiplexed sample: Homo sapiens bone marrow cell; Homo sapiens (female) bone marrow cell; ... and 21 more samples