IGVFFI5011BLUG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8045KMMQ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G5_P052_L004_I1

md5sum

eab2009341fc5519fd2325c7cf137ffb

Content MD5sum

cfd7c7f6ad1c26364b2f90af4a77d8b3

File Size

211 MB

Submitted File Name

Multiome_RNA_RP001_G5_L005_P052_S5_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

37235871

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7076WLCU

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples