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INDEXED
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SequenceFile
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IGVFFI5005GVTP
IGVFFI5005GVTP
released
validated
Json view
File Set
IGVFDS3505NISC
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 8363
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8363_R2
md5sum
73e0247d1e9ca10f917f33b09e67a680
Content MD5sum
131568043b0f7165bb19c462b699ae36
File Size
4.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2217_L7_SS-PKR-576_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8363
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
59475807
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5470EUSZ
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3555QFTM
yaml
seqspec
seqspec of IGVFFI8934BYBA, IGVFFI5005GVTP
Jason Buenrostro, Broad
1.3 KB
validated