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INDEXED
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SequenceFile
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IGVFFI5002QPIH
IGVFFI5002QPIH
released
validated
Json view
File Set
IGVFDS0602EDSF
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_mouse_bridge_775_rna_r1
md5sum
aaca730d3b2b2f24c07ee8d03164689b
Content MD5sum
79e15fa06b36fcab0cf922184fe33f58
File Size
11 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/bridge_new/IGVF_RNA_775_CASTJ_10M_21_S2_L001_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ansuman Satpathy, Stanford
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22TK7HLT3
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
28
Read Count
632306422
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5654SLCG
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male, 10 weeks) left cerebral cortex tissue
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5546XGLH
yaml
seqspec
seqspec of IGVFFI5002QPIH, IGVFFI1847WUHV, IGVFFI1397YDQK, IGVFFI9535QPOR
Ansuman Satpathy, Stanford
1.4 KB
validated