IGVFFI4997XPUG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7801WHYT(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G1_P012_L004_I1

md5sum

1db3c894183dd92cf7bf46d713a61ab8

Content MD5sum

502606bd58a80b5445333a1abbb69499

File Size

2.4 GB

Submitted File Name

Multiome_RNA_X014_G1_L001_P012_S27_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

401331831

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3402LHVF

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples