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INDEXED
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SequenceFile
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IGVFFI4993DPZN
IGVFFI4993DPZN
released
validated
Json view
File Set
IGVFDS6788EJWD
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8366
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8366_R1
md5sum
f42cc149ba04fa780498b9a02f873f2f
Content MD5sum
b065741ec3e2b5bd22c6647608e67d26
File Size
2.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2220_L7_SS-PKR-583_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8366
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
54586272
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3008DKJO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 583)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1256BVGX
yaml
seqspec
seqspec of IGVFFI4993DPZN, IGVFFI2640BUDC
Jason Buenrostro, Broad
1.3 KB
validated