IGVFFI4986YNSS

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1685FPWP(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X026_G5_P026_L002_R2

md5sum

6309b57800d8cb76f15a3dbac05b66ca

Content MD5sum

e924ae9836ad637900a636a5c8a7f2b2

File Size

17 GB

Submitted File Name

Multiome_RNA_X026_G5_L005_P026_S6_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

352314935

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1625HXVD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples