IGVFFI4962VSBE

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8184HHTJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP007_G1_P056_L008_I1

md5sum

21b121976a6ad17b44393361d9a50f83

Content MD5sum

95aa9f3cdac8eccc50c0f22ff71e2fc8

File Size

406 MB

Submitted File Name

Multiome_RNA_RP007_G1_L001_P056_S88_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

65154594

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3050FUJW

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 92 years) middle temporal gyrus tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment; Homo sapiens (male, 81 years) cerebellar cortex tissue; ... and 10 more samples