IGVFFI4934MAQC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4334WKOE(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G4_P060_L007_R2

md5sum

5a5c23d9f61c8119ccd5d32a1252fbcc

Content MD5sum

c3cd4021b8ca69c58a1871ffbc201933

File Size

3.8 GB

Submitted File Name

Multiome_RNA_RP011_G4_L005_P060_S29_L007_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

91112182

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9332LJBD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples