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INDEXED
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SequenceFile
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IGVFFI4883FQAY
IGVFFI4883FQAY
released
validated
Json view
File Set
IGVFDS1149ZGJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8386
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8386_R1
md5sum
5a44bb0134cd6fb3322aee2968865e4d
Content MD5sum
c63290130cc4f8541164a72612189225
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2256_L5_SS-PKR-605_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8386
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
68706302
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5413AOMQ
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 605)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1508FDIS
yaml
seqspec
seqspec of IGVFFI4883FQAY, IGVFFI6598DNMV
Jason Buenrostro, Broad
1.3 KB
validated