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INDEXED
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SequenceFile
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IGVFFI4879ZKYW
IGVFFI4879ZKYW
released
validated
Json view
File Set
IGVFDS4176ROKL
(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 4
File Format
fastq
Content Type
reads
md5sum
b3b067f1e49807c49fc496a4c1da0a55
Content MD5sum
14d423de902e2e34fb3271e7c1de56c2
File Size
6.0 GB
Submitted File Name
igvf_009/nova1/igvf_009_B11_D_nova_N1_L004_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI
(
HG012077
—
Ali Mortazavi
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4
Flowcell ID
H5VJ5DSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
161649936
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM1243KPHG
MultiplexedSample
adrenal gland
,
kidney
multiplexed sample: Mus musculus WSB/EiJ (male, 69 days) kidney tissue; Mus musculus CAST/EiJ (male, 72 days) kidney tissue; ... and 126 more samples
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2305WQFY
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5802HPTN
yaml
seqspec
seqspec of IGVFFI4879ZKYW, IGVFFI1691XCEP
Ali Mortazavi, UCI
1.4 KB
validated