IGVFFI4878HXOG

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4312PQZQ(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X053_G1_P072_L008_I1

md5sum

d7ea90e38fa7c0c9f2d0e2d4d222ddb4

Content MD5sum

c0e6a6dd943666325fc99504358cb98a

File Size

854 MB

Submitted File Name

Multiome_RNA_X053_G1_L001_P072_S65_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19RTCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

112097822

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5769JWBA

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 73 years) middle temporal gyrus tissue; ... and 8 more samples