IGVFFI4870YJFY

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS7070YJKH(single-nucleus ATAC-seq (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP026_G8_P075_L004_I1

md5sum

772435fa8615e7276b09ad6399b8a29a

Content MD5sum

a8c10d976d73f63ce582451ecb824fec

File Size

1.6 GB

Submitted File Name

Multiome_ATAC_RP026_G8_L008_P075_S24_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19NHCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

201650613

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2979ZZFZ

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 6 more samples