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INDEXED
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SequenceFile
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IGVFFI4844GXMG
IGVFFI4844GXMG
released
validated
Json view
File Set
IGVFDS8726KDVX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8827
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8827_R1
md5sum
88b0f2b18d7cff5ca2a8b65a4c083de1
Content MD5sum
67c7f2cff5803eb7b55150ddd047d5d3
File Size
506 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2273_L5_SS-PKR-173_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8827
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
11203443
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2760XEJI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8650CSUQ
yaml
seqspec
seqspec of IGVFFI4844GXMG, IGVFFI0233CPGE, IGVFFI4406SYTM
Jason Buenrostro, Broad
1.3 KB
validated