IGVFFI4840VSML

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6982QELB(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X046_G6_P048_L004_I2

md5sum

09fb3b3bc0edd40ce5612962c5025eea

Content MD5sum

5ede37e707e5ad55d803574156dcc0df

File Size

1.8 GB

Submitted File Name

Multiome_RNA_X046_G6_L006_P048_S18_L004_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VKTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

297754535

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4792JPXR

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 78 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 53 years) middle temporal gyrus tissue; ... and 10 more samples