Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI4837AHXY
IGVFFI4837AHXY
preview
validated
Json view
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0476WNKK
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 161
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX13-SC1_snRNA_S2_R2
md5sum
775f0b8261fa0ac65dc5f165e4570cd0
Content MD5sum
f620cc973969f409a6a8bb30ff5591bd
File Size
5.4 GB
Submitted File Name
production_data/xhlt1/data/single_cell_GEX/raw/XHLT1-POOL-XX13-SC1/BHM2MWDSX2/XHLT1-POOL-XX13-SC1-GEX_S15_L003_R2_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
161
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
90
Read Count
115184409
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9333JIPE
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (female, 33.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 55.0 years) peripheral blood mononuclear cell; ... and 18 more samples